SciLifeLab
Browse

Bioinformatics and computational biology

RSS feed
AllSEARCH
sort by:
Slides: Publishing Shiny apps as a researcher. Webinar, 2025.01.16

Slides: Publishing Shiny apps as a researcher. Webinar, 2025.01.16

presentation posted on 2025-01-16

Arnold KochariArnold Kochari
Social and technical bridges that enable sharing and reuse of sequencing data: NBIS - National Bioinformatics Infrastructure Sweden

Social and technical bridges that enable sharing and reuse of sequencing data: NBIS - National Bioinformatics Infrastructure Sweden

presentation posted on 2024-11-29

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Workshop 'How to boost your career using Open Science'

Workshop 'How to boost your career using Open Science'

presentation posted on 2024-11-18

The Swedish Reference Genome Portal: A new service facilitating access and discovery of genome data studied in Sweden

The Swedish Reference Genome Portal: A new service facilitating access and discovery of genome data studied in Sweden

poster posted on 2024-11-13

Make your data count: Process, publish and reuse your metabarcoding output in SBDI

Make your data count: Process, publish and reuse your metabarcoding output in SBDI

presentation posted on 2024-11-08

Maturity Model for Pathogen Data Platforms: Swedish Pathogens Portal

Maturity Model for Pathogen Data Platforms: Swedish Pathogens Portal

presentation posted on 2024-07-12

Liane HughesLiane Hughes
Swedish Pathogens Portal: shortening the research cycle

Swedish Pathogens Portal: shortening the research cycle

presentation posted on 2024-07-12

Liane HughesLiane Hughes
GORC Model Adoption for ELIXIR (Sweden)

GORC Model Adoption for ELIXIR (Sweden)

presentation posted on 2024-05-23

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Publish code, software and workflows: Examples of why and how from SciLifeLab

Publish code, software and workflows: Examples of why and how from SciLifeLab

presentation posted on 2024-04-16

GORC Model Adoption for ELIXIR? A pitch for strengthening ELIXIR Nodes, Platforms and Communities using the Global Open Research Commons International Model

GORC Model Adoption for ELIXIR? A pitch for strengthening ELIXIR Nodes, Platforms and Communities using the Global Open Research Commons International Model

presentation posted on 2024-02-22

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
DATASET

BAGS.v1.1: BAltic Gene Set gene catalogue

dataset posted on 2024-01-09

Tools for Reproducible Research

Tools for Reproducible Research

presentation posted on 2023-10-09

Erik FasteriusErik Fasterius

collection:
Case studies on pragmatic interoperability

posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Swedish Pathogens Portal Presentation (PLP retreat Sept 2023)

Swedish Pathogens Portal Presentation (PLP retreat Sept 2023)

presentation posted on 2023-09-07

A Nordic liaise with EOSC: Strengthen the liaise between EOSC and research organisations in the Nordic-Baltic region

A Nordic liaise with EOSC: Strengthen the liaise between EOSC and research organisations in the Nordic-Baltic region

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
(Meta)data validation approaches in data deposition support activities at NBIS

(Meta)data validation approaches in data deposition support activities at NBIS

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Workshop: Data-driven life science and the RDA: Leveraging global data communities in regional initiatives and cross-border infrastructures

Workshop: Data-driven life science and the RDA: Leveraging global data communities in regional initiatives and cross-border infrastructures

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Workshop: Leveraging EOSC and the RDA in ELIXIR Nodes, Platforms and Communities

Workshop: Leveraging EOSC and the RDA in ELIXIR Nodes, Platforms and Communities

presentation posted on 2023-09-07

Case studies from demonstrator initiatives: How to engage regional and European data infrastructure communitieswith relevant RDA and EOSC communities

Case studies from demonstrator initiatives: How to engage regional and European data infrastructure communitieswith relevant RDA and EOSC communities

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
FAIR for Infrastructure (Activity 1): report on completed milestones and outcomes

FAIR for Infrastructure (Activity 1): report on completed milestones and outcomes

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Models for leveraging the RDA and EOSC (Activity 2): report on completed milestones and outcomes

Models for leveraging the RDA and EOSC (Activity 2): report on completed milestones and outcomes

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Interoperability Use Cases (Activity 3): report on completed milestones and outcomes

Interoperability Use Cases (Activity 3): report on completed milestones and outcomes

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Capacity building for machine-actionable vocabularies (Activity 4): report on completed milestones and outcomes

Capacity building for machine-actionable vocabularies (Activity 4): report on completed milestones and outcomes

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
EOSC Alignment Strategies (Activity 5): report on completed milestones and outcomes

EOSC Alignment Strategies (Activity 5): report on completed milestones and outcomes

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Consolidation with EOSC IF (Activity 6): report on completed milestones and outcomes

Consolidation with EOSC IF (Activity 6): report on completed milestones and outcomes

presentation posted on 2023-09-07

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Swedish Pathogens Portal Poster (PLP retreat Sept 2023)

Swedish Pathogens Portal Poster (PLP retreat Sept 2023)

poster posted on 2023-09-06

WORKFLOW

aMeta: an accurate and memory-efficient ancient Metagenomic profiling workflow

workflow posted on 2023-07-04

DATASET

Is brightfield all you need for mechanism of action prediction? Image data, CellProfiler features and Grit scores

dataset posted on 2023-06-20

Data Management for Bioinformatics

Data Management for Bioinformatics

presentation posted on 2023-06-05

DATASET

Population allele frequencies, environmental data, and individual genotypes of Atlantic horse mackerel (Trachurus trachurus) collected across the east Atlantic ocean

dataset posted on 2023-05-12

DATASET

NBIS-AF2-standard and NBIS-AF2-multimer: CASP15 baseline predictions, Multiple Sequence Alignments and ancillary outputs

dataset posted on 2023-05-08

DATASET

Genotypes and population allele frequencies in Atlantic and Pacific herring samples

dataset posted on 2023-04-12

DATASET

Can we use molecular dynamics to simulate biomolecular recognition?

dataset posted on 2023-04-11

Introduction and overview of Data Centre services 
for IT and data management

Introduction and overview of Data Centre services 
for IT and data management

presentation posted on 2023-03-30

Telling stories of convergence—on shared interoperability practices across infrastructures and global data communities in the life sciences

Telling stories of convergence—on shared interoperability practices across infrastructures and global data communities in the life sciences

presentation posted on 2023-03-20

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Interoperability in the life sciences: Converging on practices for sharing research information and tools

Interoperability in the life sciences: Converging on practices for sharing research information and tools

presentation posted on 2023-03-15

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Research outputs beyond the paper: Code, research software & computational workflows

Research outputs beyond the paper: Code, research software & computational workflows

presentation posted on 2023-03-13

Wolmar Nyberg ÅkerströmWolmar Nyberg Åkerström
Case studies and use cases as means of effectively demonstrating value and engaging stakeholders

Case studies and use cases as means of effectively demonstrating value and engaging stakeholders

presentation posted on 2023-03-13

DATASET

COI reference sequences from BOLD DB

dataset posted on 2023-01-16

John SundhJohn Sundh
DATASET

Data used in exercises in course Introduction to Data Management Practices

dataset posted on 2022-11-18