### General information

Author: Mats E. Pettersson, Angela P. Fuentes-Pardo, Christina M. Rochus, Erik D. Enbody, Huijuan Bi, Risto Väinölä, Leif Andersson
Contact e-mail: leif.andersson@imbim.uu.se
DOI: 10.17044/scilifelab.22361761
License: CC BY 4.0
This readme file was last updated: 2023-04-05


### Dataset description

Individual genotypes, sample IDs and pool-wise allele frequencies used in "A long-standing hybrid population between Pacific and Atlantic herring in a subarctic fjord of Norway" (GBE-230119). The data are stored as tab-separated, gzipped text files. For the pool frequencies, sample names are in the header. For the individuals, the genotypes for each SNP are stored as a single string with out spaces or tabs. The order is the indicated in the sample file, and each individual is represented by two characters (ie haplotype 1 and haplotype 2). Thus, the first and second character represents the first individual, the third and fourth character the second individual et c.


### Data files

60.Neff.freq.gz - pool-wise allele frequencies
79.phased_GT.txt.gz - individual genotypes
79.phased_sample.txt - ordered individual sample names