Category details - SciLifeLab Data Repository

DATASET

Data for the Populus tremula v2.2. genome project and associated genome-wide association study

dataset posted on 2024-08-22

DATASET

Supplemental data from the genome assembly and annotation of the Clouded Apollo Butterfly (Parnassius mnemosyne)

dataset posted on 2024-06-26

DATASET

Allel-specific read counts for sprat population samples used in "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring"

dataset posted on 2024-05-23

DATASET

DNAseq of S. coelicolor foraging sectors

dataset posted on 2024-04-25

collection:
Ecological genomics of the Northern krill

posted on 2024-03-29

DATASET

5. Ecological genomics of the Northern krill: Gene family evolution and homology

dataset posted on 2024-03-28

DATASET

6. Ecological genomics of the Northern krill: Genome-scale variation

dataset posted on 2024-03-28

DATASET

7. Ecological genomics of the Northern krill: Genome-scale comparisons of adaptive divergence

dataset posted on 2024-03-28

DATASET

8. Ecological genomics of the Northern krill: Recombination rates and demographic history

dataset posted on 2024-03-28

DATASET

1. Ecological genomics of the Northern krill: Genome assembly DNA sequences

dataset posted on 2024-03-28

DATASET

2. Ecological genomics of the Northern krill: Genome assembly mask sequences

dataset posted on 2024-03-28

DATASET

3. Ecological genomics of the Northern krill: Genome assembly annotations (genes and repeats)

dataset posted on 2024-03-28

DATASET

4. Ecological genomics of the Northern krill: Genome-wide signatures of DNA methylation

dataset posted on 2024-03-28

JOURNAL CONTRIBUTION

Supplementary Data for "Phylogeny and Expansion of Serine/Threonine Kinases in Phagocytotic Bacteria in the Phylum Planctomycetota"

journal contribution posted on 2024-03-21

DATASET

Genotyping data from 209 Swedish Labrador retrievers

dataset posted on 2024-03-15

Maja Louise ArendtMaja Louise Arendt

collection:
Comparative population transcriptomics in krill

posted on 2023-11-02

Andreas WallbergAndreas Wallberg

Additional files for "Eurasian back-migration into Northeast Africa was a complex and multifaceted process"

figure posted on 2023-08-16

DATASET

The Chironomus tentans draft genome annotation

dataset posted on 2023-08-03

Spatial Multimodal Analysis (SMA) - Spatial Transcriptomics

dataset posted on 2023-05-16

DATASET

Whole-genome sequencing in B-cell lymphomas for circulating tumor DNA analysis by multiplex digital PCR for disease monitoring

dataset posted on 2023-05-12

DATASET

Long-read whole genome sequencing of human T cells

dataset posted on 2023-05-08

SOFTWARE

Code for Atlas of mRNA translation and decay for bacteria

software posted on 2023-03-30

FIGURE

Genome-wide DNA Copy Number Analysis of high hyperdiploid acute lymphoblastic leukemia

figure posted on 2023-02-06

DATASET

SNP array and whole genome sequencing data from: Clonal origin and development of high hyperdiploidy in childhood acute lymphoblastic leukemia

dataset posted on 2023-02-02

DATASET

Timing chromosomal amplification events using patterns of somatic mutations in high hyperdiploid acute lymphoblastic leukemia

dataset posted on 2023-02-02

DATASET

Test dataset from: GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species

dataset posted on 2022-08-25

DATASET

Genotype data for analysis of chronic kidney disease in boxer dogs

dataset posted on 2022-07-04

DATASET

Single base substitution mutational signatures in pediatric acute myeloid leukemia based on whole genome sequencing

dataset posted on 2022-04-04

DATASET

Single cell whole genome sequencing of high hyperdiploid acute lymphoblastic leukemia

dataset posted on 2022-02-22

DATASET

Single base substitution and insertion/deletion mutational signatures in adult core binding factor acute myeloid leukemia

dataset posted on 2022-02-18

DATASET

Single Cell Smart-Seq 3 RNA-Seq and Bulk Exome Seq from Breast Cancer Patients

dataset posted on 2021-08-17

DATASET

Genomic characterization of the barnacle Balanus improvisus reveals extreme nucleotide diversity in coding regions

dataset posted on 2021-04-16

DATASET

Data from: Genomic characterization of relapsed acute myeloid leukemia reveals novel putative therapeutic targets

dataset posted on 2021-02-11

DATASET

Browsable TIF-Seq2 tracks from K562 after imatinib treatment

dataset posted on 2020-12-03

DATASET

Improved computational analysis of ribosome dynamics from 5’P degradome data using fivepeseq

dataset posted on 2020-09-17

Genetics

Data for the Populus tremula v2.2. genome project and associated genome-wide association study

Supplemental data from the genome assembly and annotation of the Clouded Apollo Butterfly (Parnassius mnemosyne)

Allel-specific read counts for sprat population samples used in "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring"

DNAseq of S. coelicolor foraging sectors

collection: Ecological genomics of the Northern krill

5. Ecological genomics of the Northern krill: Gene family evolution and homology

6. Ecological genomics of the Northern krill: Genome-scale variation

7. Ecological genomics of the Northern krill: Genome-scale comparisons of adaptive divergence

8. Ecological genomics of the Northern krill: Recombination rates and demographic history

1. Ecological genomics of the Northern krill: Genome assembly DNA sequences

2. Ecological genomics of the Northern krill: Genome assembly mask sequences

3. Ecological genomics of the Northern krill: Genome assembly annotations (genes and repeats)

4. Ecological genomics of the Northern krill: Genome-wide signatures of DNA methylation

Supplementary Data for "Phylogeny and Expansion of Serine/Threonine Kinases in Phagocytotic Bacteria in the Phylum Planctomycetota"

Genotyping data from 209 Swedish Labrador retrievers

collection: Comparative population transcriptomics in krill

Additional files for "Eurasian back-migration into Northeast Africa was a complex and multifaceted process"

The Chironomus tentans draft genome annotation

Spatial Multimodal Analysis (SMA) - Spatial Transcriptomics

Whole-genome sequencing in B-cell lymphomas for circulating tumor DNA analysis by multiplex digital PCR for disease monitoring

Long-read whole genome sequencing of human T cells

Code for Atlas of mRNA translation and decay for bacteria

Genome-wide DNA Copy Number Analysis of high hyperdiploid acute lymphoblastic leukemia

SNP array and whole genome sequencing data from: Clonal origin and development of high hyperdiploidy in childhood acute lymphoblastic leukemia

Timing chromosomal amplification events using patterns of somatic mutations in high hyperdiploid acute lymphoblastic leukemia

Test dataset from: GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species

Genotype data for analysis of chronic kidney disease in boxer dogs

Single base substitution mutational signatures in pediatric acute myeloid leukemia based on whole genome sequencing

Single cell whole genome sequencing of high hyperdiploid acute lymphoblastic leukemia

Single base substitution and insertion/deletion mutational signatures in adult core binding factor acute myeloid leukemia

Single Cell Smart-Seq 3 RNA-Seq and Bulk Exome Seq from Breast Cancer Patients

Genomic characterization of the barnacle Balanus improvisus reveals extreme nucleotide diversity in coding regions

Data from: Genomic characterization of relapsed acute myeloid leukemia reveals novel putative therapeutic targets

Browsable TIF-Seq2 tracks from K562 after imatinib treatment

Improved computational analysis of ribosome dynamics from 5’P degradome data using fivepeseq

collection:
Ecological genomics of the Northern krill

collection:
Comparative population transcriptomics in krill