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Supplementary data for "deconwolf"

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posted on 2024-07-31, 13:29 authored by Erik WernerssonErik Wernersson, Eleni GelaliEleni Gelali, Gabriele Girelli, Su Wang, David Castillo, Christoffer Mattsson LangsethChristoffer Mattsson Langseth, Quentin VerronQuentin Verron, Huy Q. Nguyen, Shyamtanu Chattoraj, Anna Martinez Casals, Hans Blom, Emma Lundberg, Mats Nilsson, Marc A. Marti-Renom, Chao-Ting Wu, Nicola CrosettoNicola Crosetto, Magda BienkoMagda Bienko

This repository contains data used in https://doi.org/10.1038/s41592-024-02294-7


The authors acknowledge the Spatial Proteomics National Facility at

SciLifeLab, funded by SciLifeLab and the Swedish Research Council

(grant no. VR-RFI 2019-00217) as a member of the National Microscopy

Infrastructure (NMI). The authors also acknowledge the Advanced

Light Microscopy facility at KTH-SciLifeLab, also part of the National

Microscopy Infrastructure NMI (grant no. VR-RFI 2019-00217), for

support with STED and confocal imaging. The authors thank Atlas

Antibodies for providing the tissue sample with which to compare

images acquired using a widefield and a confocal microscope. This

work was supported by funding from the Swedish Cancer Research

Foundation (Cancerfonden, grant no. CAN 2018/604) and the Swedish

Research Council (grant no. 2019-01238) to M.N.; by funding from the

Knut and Alice Wallenberg Foundation (grant no. KAW 2018.0172), the

Erling Persson Foundation, and the European Union’s Horizon 2020

research and innovation programme (grant no. EPIC-XS_823839) to

E.L.; by funding from the National Human Genome Research Institute

of the National Institutes of Health (grant no. RM1HG011016) to C.-t.W.

and M.A.M.-R.; by funding from the National Institutes of Health

(grants no. RM1HG011016; R01HD091797; R01GM123289) and Bruker

Nano Inc. to C.-t.W.; by funding from the Swedish Cancer Research

Foundation (Cancerfonden, grant no. 21 1785 Pj), the Swedish

Foundation for Strategic Research (SSF, grant no. BD15_0095),

and the Strategic Research Programme in Cancer (StratCan, now

Cancer Research KI) at Karolinska Institutet (grant. no. 2201) to N.C.;

and by funding from the Ragnar Söderberg Foundation (Fellows in

Medicine 2016), the Human Frontier Science Program (HFSP Career

Development Award), the Swedish Cancer Research Foundation

(Cancerfonden, grant no. 22 2240 Pj 01 H), the Swedish Research

Council (grant. no. 2020-02657_3), and the European Research

Council under the European Union’s Horizon 2020 research and

innovation programme (grant no. StG-2016

Funding

National Microscopy Infrastructure

Swedish Research Council

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Genotype-phenotype correlations among subclones within tumors

Swedish Research Council

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European Proteomics Infrastructure Consortium providing Access

European Commission

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Center for Genome Imaging

National Human Genome Research Institute

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Illuminating Genome Architecture in Health and Disease

Swedish Research Council

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Swedish Cancer Research Foundation (Cancerfonden, grant no. CAN 2018/604)

Knut and Alice Wallenberg Foundation (grant no. KAW 2018.0172),

National Institutes of Health (grant no. R01HD091797)

National Institutes of Health (grants no. R01GM123289)

Swedish Cancer Research Foundation (Cancerfonden, grant no. 21 1785 Pj

Swedish Foundation for Strategic Research (SSF, grant no. BD15_0095)

Strategic Research Programme in Cancer (StratCan, now Cancer Research KI) at Karolinska Institutet (grant. no. 2201)

Swedish Cancer Research Foundation (Cancerfonden, grant no. 22 2240 Pj 01 H)

European Research Council under the European Union’s Horizon 2020 research and innovation programme (grant no. StG-2016)

History

Publisher

SciLifeLab

SciLifeLab acknowledgement

  • Spatial Proteomics unit
  • Integrated Microscopy Technologies unit

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