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KrakenUniq database based on microbial part of NCBI NT, June 2020, combined with human and complete eukaryotic reference genomes

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posted on 19.09.2022, 10:54 authored by Nikolay OskolkovNikolay Oskolkov

This is a KrakenUniq databases that comprises all mirobial organisms from NCBI NT https://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/nt.gz, June 2020, as well as human and eukaryotic organisms with complete reference genomes. The database was built by Nikolay Oskolkov, Lund University, NBIS SciLifeLab using KrakenUniq KrakenUniq, https://github.com/fbreitwieser/krakenuniq, version 0.5.8. All questions regarding the database should be sent to nikolay.oskolkov@scilifelab.se

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Knut and Alice Wallenberg Foundation as part of the National Bioinformatics Infrastructure Sweden at SciLifeLab

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NBIS / SciLifeLab

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