.IDX
database.idx (8 GB)
DATASET
database.report.tsv (0.31 kB)
TEXT
database-build.log (0.19 kB)
TEXT
library-files.txt (1.07 kB)
TEXT
seqid2taxid.map (265.18 MB)
.ORIG
seqid2taxid.map.orig (215.82 MB)
taxDB (1.52 GB)
.ORIG
taxDB.orig (107.06 MB)
TEXT
database.kdb.counts (117.16 MB)
.TSV
database.kraken.tsv (28.85 MB)
.KDB
database.kdb (434.07 GB)
.JDB
database.jdb (434.07 GB)
TEXT
README.txt (2.57 kB)
TEXT
MANIFEST.txt (0.37 kB)
1/0
KrakenUniq database based on microbial part of NCBI NT, June 2020, combined with human and complete eukaryotic reference genomes
This is a KrakenUniq databases that comprises all mirobial organisms from NCBI NT https://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/nt.gz, June 2020, as well as human and eukaryotic organisms with complete reference genomes. The database was built by Nikolay Oskolkov, Lund University, NBIS SciLifeLab using KrakenUniq KrakenUniq, https://github.com/fbreitwieser/krakenuniq, version 0.5.8. All questions regarding the database should be sent to nikolay.oskolkov@scilifelab.se
