TEXT

database.kdb.counts (18.13 kB)

.TSV

database.kraken.tsv (100.66 MB)

DATASET

database.report.tsv (223.92 kB)

TEXT

database-build.log (0.19 kB)

TEXT

library-files.txt (16 kB)

TEXT

seqid2taxid.map (1.01 MB)

.ORIG

seqid2taxid.map.orig (838.46 kB)

taxDB (107 MB)

.ORIG

taxDB.orig (105.29 MB)

.IDX

database.idx (8 GB)

.JDB

database.jdb (9.64 GB)

.KDB

database.kdb (9.64 GB)

TEXT

MANIFEST.txt (0.37 kB)

TEXT

README.txt (1.48 kB)

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KrakenUniq database based on complete microbial genomes from NCBI RefSeq, May 2020

online resource

posted on 2022-10-11, 13:46 authored by Nikolay OskolkovNikolay Oskolkov

This is a KrakenUniq database that comprises all mirobial organisms with complete reference genomes from NCBI RefSeq, https://ftp.ncbi.nlm.nih.gov/refseq/release/, May 2020. The database was built by Nikolay Oskolkov, Lund University, NBIS SciLifeLab using KrakenUniq KrakenUniq, https://github.com/fbreitwieser/krakenuniq, version 0.5.8. All questions regarding the database should be sent to nikolay.oskolkov@scilifelab.se