Improved computational analysis of ribosome dynamics from 5’P degradome data using fivepeseq
Version 2 2020-09-17, 12:03
Version 1 2020-07-16, 19:31
dataset
posted on 2020-09-17, 12:03 authored by Vicent PelechanoVicent Pelechano, Lilit Nersisyan, Maria Ropat<p>Supplementary information for manuscript: "Improved computational analysis of ribosome dynamics from 5’P degradome data using fivepeseq" from Lilit Nersisyan, Maria Ropat and Vicent Pelechano (2020)</p><p><br></p><p>Dataset updated to fivepseq version1.0b6<br></p><p><br></p><p>5'P mRNA degradome datasets analyzed with fivepseq. (http://pelechanolab.com/software/fivepseq/). Raw <i>Saccharomyces cerevisiae</i> data is available from GEO under accession code GSE91064 and for <i>Arabidopsis thaliana</i> under accessions GSE72505 and GSE77549. <br></p>
Funding
Ribosomal frameshifts as a novel mechanism to control RNA turnover in stress
European Commission
Find out more...Impact of transcriptome complexity on gene expression dynamics
Swedish Research Council
Find out more...Wallenberg Academy Fellowship (KAW 2016.0123)
Swedish Foundation’s Starting Grant (Ragnar Söderberg Foundation)
Karolinska Institutet (SciLifeLab Fellowship, SFO and KI funds)
History
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