GSEA-based Pathway Analysis Results of Matched Primary and Locally Recurrent Breast Tumors

GSEA analysis of recurrent and primary tumor sub-divided by estrogen receptor status. Output is provided for RNA and protein data for both the HALLMARKS and KEGG databases.

Test was run on ER positive and negative sample subgroups, with recurrent samples over primary tumors.

This dataset was used for Figure 5 in the following manuscript:

 "Proteogenomics decodes the evolution of human ipsilateral breast cancer". De Marchi T, Pyl PT, Sjöström M, Reinsbach SE, DiLorenzo S, Nystedt B, Tran L, Pekar G, Wärnberg F, Fredriksson I, Malmström P, Fernö M, Malmström L, Malmström J, Nimèus E. accepted for publication