<div>All scripts for predictions and analysis are available from https://github.com/ElofssonLab/bioinfo-toolbox/trRosetta/</div><div>Details for each run are available from https://github.com/ElofssonLab/bioinfo-toolbox/benchmark5/benchmark4.3/.</div><div>All models joined alignments, and evaluation results are available from a figshare repository[44].</div><div><br></div><div>The data is organized as follows</div><div><br></div><div>1) One diretora (N*/ as well as ./) contains all the results and data for one set of parameters</div><div>2) In each directory the following subdirectories are included</div><div>2a) seq/ (all sequences)</div><div>2b) pdb/ (all orginal pdb files) </div><div>2c) dimer/ all merged msa files</div><div>2d) pymodel/ all models generated and the measuremenst (in csv files) to evalute their performance.</div><div>3) In the director Figures/ all figures, scripts to generat them as well as summary of all predictions in a csv files is included</div><div><br></div>
Funding
Towards a complete map of the transmembrane proteome in Yeast and E.Coli